## What changed
- Add nullable `startedAtMs` and `completedAtMs` fields to `ThreadItem` in live notifications and turn history. Values are Unix milliseconds when recorded.
- Preserve recorded item times through history reconstruction, pagination, and resume, including command start times recorded during approval.
- Separate the Rust item payload into `ThreadItemPayload` while keeping the JSON payload flat, and update consumers, schemas, and generated TypeScript and Python types.
## Testing
Extend coverage for timestamp serialization, history reconstruction, paginated reads and resume, and persisted Python SDK items.
GitOrigin-RevId: ecbcee95af52db7c807b46a6e9deb30e5fba1f80
## Why
Clients starting delegated work need to attribute descendant turns to the original turn and retain that attribution through completion and history reads.
## What changed
- Accept optional `parentTurnId` and `rootTurnId` in `turn/start`, and expose `rootTurnId` on returned turns and lifecycle notifications.
- Default new turns to their own root when none is supplied. Preserve the active turn's root when steering, ignoring incoming lineage fields.
- Carry root IDs through completion, interruption, recovery, and fork boundaries, and persist them for paginated history reads. Leave unknown roots null in older history.
- Update protocol schemas and generated TypeScript and Python bindings.
## Testing
Extend coverage for default and explicit roots, steering without changing lineage, interrupted and recovered turns, history reads after restart in both history modes, nested fork pagination, and compatibility with older database writers.
GitOrigin-RevId: f1a570a12bd11742929fd2e8b017e5d35aa07dcb
## What changed
- Carry opaque `review_target` values through misalignment errors and expose optional `reviewTarget` in the app-server protocol and generated clients. Preserve the value verbatim and redact it from debug output.
- Keep target-based `misalignment_override` metadata on turn requests, preserve it across steering updates, and exclude it from compaction and external MCP metadata. Reject overrides from global Responses metadata while retaining legacy timestamp behavior for per-turn overrides.
## Testing
Extend coverage for error propagation, debug and rollout redaction, steering preservation, and metadata filtering. Verify that automatic compaction omits the review target while turn requests before and after compaction retain it.
GitOrigin-RevId: 8c1abb076a206ff5927a4acc31bd25e3efc2bff9
## Why
Guardian denial-limit interruptions lack a structured error identifying the cause. Make this opt-in because older clients may not recognize the new error in shared history.
## What changed
- Add `auto_review.circuit_break_action = "strict"` to attach `TooManyDenials` to the interrupted turn. The default leaves the error unset.
- Expose `turn.error.codexErrorInfo = "tooManyDenials"` in app-server notifications and saved history, and update protocol schemas and generated types.
- Preserve the warning, denial limit, and interrupted status without emitting a separate error notification.
## Testing
Add an integration test covering omitted, `default`, and `strict` settings, checking warnings, live turn errors, the absence of separate error notifications, and persisted turn errors after restart.
GitOrigin-RevId: cb5d379e64728d4d7b9daf834c13756e4a70db31
## What changed
Remove `thread/rollback`, its request and response types, generated bindings, and the core `Op::ThreadRollback` operation. Requests now follow the generic unknown-method rejection path. Document `thread/revert` as the alternative for paginated threads.
Keep historical `ThreadRolledBack` markers and legacy error deserialization so existing rollouts remain compatible with replay and migration.
## Testing
Adapt retained-context and Guardian history tests to append legacy rollback markers and resume threads, preserving coverage of surviving instructions, answers, and review history.
GitOrigin-RevId: b3da1becdf86b1869275aacb0ffc2817cee5af2e
## Why
Clients need a per-thread Daybreak toggle that survives restarts and can be
restored on resume without changing the access program of an active or future
turn.
## What changed
- Add experimental `daybreakEnabled` support to `thread/metadata/update` and
expose the saved value on thread responses.
- Store the preference in SQLite, including for threads without a first turn,
and preserve it through reads, resumes, reconciliation, and restarts.
- Copy the preference when forking a thread while keeping subsequent updates
independent.
- Keep `daybreakEnabled` separate from the per-turn `cyberAccessProgram` field;
app-server does not derive one from the other.
## Testing
- Cover persistence across restarts, cold reads, reconciliation, and forks.
- Verify metadata updates do not alter the access program of active or later
turns.
GitOrigin-RevId: bcf987a9fcd7b0ac8a88b1c8f0df06b33ed8ad6e
## What changed
- Add the creation-time `originator` to app-server thread responses and `thread/started` notifications.
- Persist originators in thread metadata and preserve the first recorded value across list, read, resume, rollout, and SQLite paths.
- Add an `originators` allowlist to `thread/list` for hosted backends. The local app-server accepts omitted or empty values but rejects nonempty filters.
## Testing
- Cover originator persistence across server restarts and list, read, and resume requests.
- Verify local `thread/list` handling for nonempty, omitted, null, and empty originator filters.
- Heap-allocate large TUI dispatcher futures in affected tests to keep them within the Windows test-thread stack.
GitOrigin-RevId: 73ad6e61b8fdd2d93a22d1f971723a19ec7be3fc
## What changed
- Add the experimental `Thread.environments` field with each selected environment's ID, working directory, and runtime workspace roots.
- Populate the field from live thread state in start, resume, read, list, and unarchive responses. Use `null` for unloaded threads and an empty list when a loaded thread has no environment selection.
- Document that the field reports selection rather than connection status and does not affect executor selection or resume behavior.
## Testing
- Cover selection updates, unloaded and resumed threads, loaded pathless unarchives, and clients that subscribe after environment connection notifications.
GitOrigin-RevId: a6daa06aff7089d7c5a1e4c7d03109b41f12fa3c
## What changed
- Add nullable `model` and `reasoningEffort` fields to the shared app-server `Thread` object and generated schemas.
- Report current settings for loaded threads and the latest persisted settings for unloaded threads across thread read, list, start, resume, rollback, metadata update, and notification paths.
- Keep unavailable legacy or filesystem-only settings nullable, and allow metadata reads without loading a thread or dispatching queued work.
## Testing
- Cover live-setting precedence, persisted settings after restart, null legacy values, and model metadata returned by thread lifecycle operations.
GitOrigin-RevId: 22ebe8a8d1910a820d90a97730d812a00d8c1372
## Why
App-server clients need the explanation and steering instruction returned with a
misalignment policy violation to offer a user-confirmed continuation. Missing or
incomplete details must continue to behave as a terminal block.
## What changed
- Parse optional misalignment classification, explanation, and steering details
from streamed and HTTP Responses errors and propagate them through core errors.
- Include the details in live app-server `error` and `turn/completed` payloads and
export the corresponding protocol schemas and TypeScript types.
- Keep explanations and steering messages out of serialized rollout events and
redact them from debug output.
- Document how clients can resume with `turn/start` after user confirmation.
## Testing
- Cover streamed, HTTP, and WebSocket-wrapped errors, including malformed and
classification-only details.
- Verify live app-server notifications expose resumable details without writing
the explanation or steering message to the rollout.
GitOrigin-RevId: 329258a444c2cd91d0c57ab1720830b33ddcfac5
## What changed
- Make `thread/turns/list`, `thread/items/list`, and `thread/revert` available
without the experimental API capability.
- Stabilize `thread/reverted`, `thread.historyMode`, and the pagination fields
used by `thread/resume` and `thread/fork`.
- Publish the promoted requests, responses, and fields in the stable JSON and
TypeScript schemas, and update the app-server documentation accordingly.
GitOrigin-RevId: 18b8c53c265211597bb1a62fd62f66f4a3df5f06
## Why
Guardian reviews were reported with the generic `subagent` thread source, making them indistinguishable from other delegated threads in persisted metadata and analytics.
## What changed
- Add the `guardian_review` thread source to the core protocol and app-server schema.
- Assign it to Guardian reviewer sessions and propagate the configured source through turn metadata, rollouts, and analytics.
- Continue treating Guardian reviews like subagents for paginated history and trusted-provenance checks.
## Testing
- Cover protocol round trips, delegate source selection, emitted analytics, request metadata, and persisted rollout metadata.
GitOrigin-RevId: 07480c122715812874c9d3b48bb39fc5c86b2367
## What changed
- Add optional `icon` and `color` appearance fields to custom thread sections and expose them through the app-server protocol.
- Persist appearance metadata in SQLite and include it when listing sections or returning threads.
- Let `threadSection/update` preserve an omitted appearance, clear it with `null`, or replace it with a new value.
- Reject appearance fields larger than 64 bytes.
## Testing
- Cover protocol compatibility, persistence across restart, update and clear behavior, and field-length validation.
GitOrigin-RevId: 8f55ce4f42f8bd17aa5416848a85845f681953df
## Why
Normal app-server protocol builds do not need the `ts-rs` and `schemars`
implementations used to generate schema exports.
## What changed
- Embed compressed stable and experimental TypeScript and JSON schema exports,
and serve the existing export APIs from those artifacts.
- Use no-op schema derives in non-test builds while keeping the real generators
available for fixture regeneration and tests.
- Move schema fixture regeneration behind a Python helper and update
`just write-app-server-schema --experimental` to refresh the experimental
embedded exports.
## Testing
- Verify embedded exports match freshly generated stable and experimental
schemas.
- Verify export options and on-disk output remain compatible.
GitOrigin-RevId: e8536338b457e6eec34bdf29ec0684144bd13734
## What changed
- Add `thread/section/move` to atomically move a thread into, within, or out of a section. Threads can be inserted before an existing member or appended, and moves within a section preserve `sectionEnteredAt`.
- Add `section_position` sorting to `thread/list`, with ascending order as its default, and expose `sectionEnteredAt` in thread responses.
- Persist section positions and entry times in SQLite, including migration of existing section members into recency order. Section membership is no longer updated through `thread/metadata/update`.
## Testing
- Cover section moves, reordering, pagination, persistence across restarts and rollout reconciliation, concurrent updates, and rank renumbering.
GitOrigin-RevId: aec6d7ddedca5277029b5caf5c074975397e956c
## What changed
- Replace the `isPinned` thread metadata and filters with an optional persisted
`section` and `sectionId`.
- Add the paginated `threadSection/list` app-server method so clients can
discover sections even when they contain no threads.
- Seed a stable `Pinned` section, validate section assignments, and support
filtering for a specific section or for unsectioned threads.
## Testing
- Cover section protocol serialization, listing and pagination, metadata
updates, filtering, persistence, migration compatibility, and operation
without SQLite state.
GitOrigin-RevId: 7972b5471d29317b9387bfd90aa9f573f691ad4c
## What changed
- Add `isPinned` to thread responses and allow `thread/metadata/update` to pin or unpin stored threads.
- Add an `isPinned` filter to `thread/list`, including cursor-based pagination and combinations with relationship filters.
- Persist pin state in SQLite without modifying rollout files, default existing threads to unpinned, and preserve pins through reconciliation and archive transitions.
## Testing
- Cover protocol serialization, database migration and indexing, pin updates, filtered pagination, rollout reconciliation, and archive/unarchive behavior.
GitOrigin-RevId: c2eacabd6dae465e2ae6ce8a169e00740960cdb7
## Why
Multi-agent V2 spawned threads are controlled by their parent and reject direct
app-server input. The TUI should expose that ownership instead of presenting an
input flow that the server will reject.
## What changed
- Add the experimental `Thread.canAcceptDirectInput` capability for loaded
threads and populate it from the same policy used to validate `turn/start`
and `turn/steer`. Stored, unloaded threads report `null`.
- Carry the capability through TUI thread discovery, selection, startup, and
resume flows, with a compatibility fallback for older app servers.
- Present parent-owned threads as view-only, preserve drafts and queued input,
block agent-directed commands and settings shortcuts, and keep local
navigation and inspection commands available.
## Testing
- Cover V1 writable and V2 view-only spawned threads through selection and
resume.
- Cover composer submission paths, queued and initial input preservation,
allowed navigation commands, settings shortcuts, and the view-only UI.
GitOrigin-RevId: 495ad051249e5577fb0b0c1cc8c40a0998d04918
## Description
This PR adds a new `historyMode = "legacy" | "paginated"` to `Thread`.
This will be stored in `SessionMeta` in the JSONL rollout file and as a
new column in the SQLite thread_metadata table, and exposed on
`thread/start` and on the `Thread` object in app-server.
## What changed
- Added canonical `ThreadHistoryMode` with `legacy` and `paginated`,
defaulting old and new SessionMeta to `legacy`.
- Carried `history_mode` through core session config, ThreadStore stored
metadata, local/in-memory stores, rollout metadata extraction, and the
existing SQLite `threads` table.
- Added experimental `historyMode` to app-server v2 `Thread` and
`thread/start`.
- Made paginated stored threads metadata-discoverable but unsupported
for legacy full-history reads, `load_history`, live resume, and create
paths.
- Regenerated app-server schema fixtures and added
protocol/state/thread-store/app-server coverage for persistence and
fail-closed behavior.
## Compatibility floor
Because users may be running various versions of Codex binaries on the
same machine (TUI, Codex App, etc.), we will need to establish a
compatibility floor for upcoming paginated threads, which will change
how thread storage reads and writes work.
The overall plan here:
```
Release N:
- Add historyMode to SessionMeta / Thread / SQLite metadata.
- Teach binaries to understand paginated threads.
- If a binary sees `historyMode="paginated"` but does not support the paginated contract, it refuses to resume/mutate the thread.
- Default remains `"legacy"`.
Release N+1:
- First-party clients start opting into paginated threads where appropriate.
- Internal dogfood / staged rollout.
- Measure old-client usage and paginated-thread unsupported errors.
Release N+2:
- Only after Release N+ is overwhelmingly deployed, make paginated the default.
- Accept that a small tail of N-1-or-older binaries may not understand paginated threads.
```
The important behavior change is fail-closed handling for a binary that
encounters a persisted `paginated` thread before it knows how to fully
support paginated history. In app-server, if a thread is `paginated`, we
will:
- allow metadata-only discovery paths like `thread/list` and
`thread/read(includeTurns=false)`, so clients can still see the thread
and inspect its `historyMode`
- reject legacy full-history/live-thread paths like
`thread/read(includeTurns=true)` and `thread/resume` with an unsupported
JSON-RPC error
- avoid silently treating an unknown or future `historyMode` as `legacy`
Under the hood, the ThreadStore layer also rejects legacy operations
that would need to load or replay the full thread history for a
paginated thread. That gives us the behavior we want for Release N:
future paginated threads are visible, but this binary fails closed
instead of trying to operate on them as if they were legacy threads.
## Summary
- Revert #28655, restoring the thread `recencyAt` behavior introduced by
#27910.
- Move `threads_recency_at` to migration 0039 so it no longer collides
with `external_agent_config_imports` at version 0038.
- Repair databases that already applied the recency migration as version
38 by moving the matching migration-history row to version 39 before
SQLx validation. The current version-38 migration can then apply
normally.
## Validation
- `just test -p codex-state
migrations::tests::repairs_recency_migration_that_was_applied_as_version_38`
- `just test -p codex-state -p codex-rollout -p codex-thread-store -p
codex-app-server-protocol -p codex-tui`: 3,439 passed; six TUI tests
could not open the machine's existing read-only incident database at
`~/.codex/sqlite/state_5.sqlite`.
- `just fix -p codex-state`
- `just fmt`
- Verified that state migration versions are unique.
## Why
Revert #27910 to remove the newly introduced thread `recencyAt`
persistence and API behavior from `main`.
## What changed
This reverts commit `fac3158c2a783095768076489815f361fa9b0db4`,
including the state migration, thread-store propagation, app-server API
surface, generated schemas, and related tests.
## Validation
Not run before opening; relying on CI for the initial fast signal.
## Summary
Add a server-owned `recencyAt` timestamp and `recency_at` thread-list
sort key for product recency ordering while preserving the existing
meaning of `updatedAt` as the latest persisted thread mutation.
This is the server-side alternative to #27697. Rather than narrowing
`updatedAt`, clients can sort the sidebar by `recency_at` and continue
treating `updatedAt` as mutation time.
Paired Codex Apps PR:
[openai/openai#1024599](https://github.com/openai/openai/pull/1024599)
## Contract
- `recencyAt` initializes when a thread is created.
- A turn start advances `recencyAt` monotonically.
- Commentary, agent output, tool results, token/accounting updates, turn
completion, archive, unarchive, resume, and generic metadata writes do
not advance it.
- `updatedAt` retains its existing behavior and continues to advance for
persisted thread mutations.
- Current servers populate `recencyAt`; the response field is optional
in generated TypeScript so clients connected to older servers can fall
back to `updatedAt`.
- Filesystem-only fallback uses existing updated/mtime ordering when
SQLite is unavailable.
## Persistence and compatibility
Migration 0038 adds second- and millisecond-precision recency columns,
backfills them from the existing updated timestamp, creates list
indexes, and includes an insert trigger so older binaries writing to a
migrated database seed recency without causing later mutations to
advance it.
Generic metadata upserts preserve existing recency values. Turn-start
updates use a dedicated monotonic touch, and process-local allocation
keeps millisecond cursor values unique. State DB list, search, read,
filtered-list repair, rollout fallback propagation, and app-server
conversions all carry the new field.
## API
`Thread` responses include:
```ts
recencyAt?: number
```
`thread/list` and `thread/search` accept:
```json
{ "sortKey": "recency_at" }
```
Generated TypeScript and JSON schemas are included.
## Validation
- `just test -p codex-state` — 146 passed
- `just test -p codex-rollout` — 69 passed
- `just test -p codex-thread-store` — 81 passed
- `just test -p codex-app-server-protocol` — 231 passed
- Focused app-server list ordering, response mapping, archive/unarchive,
and resume lifecycle tests passed
- Scoped `just fix` for state, rollout, thread-store,
app-server-protocol, and app-server
- `just fmt`
- `git diff --check`
- Independent correctness, simplicity, elegance, security, and
test-quality reviews; actionable ordering, lifecycle, query-projection,
and timestamp-uniqueness findings were addressed
## Why
- `ThreadSource` currently defines a closed set of core-owned values
- Product features also create threads for background or scheduled work
- Adding every product-specific value to the core enum would require
repeated `codex-rs` protocol changes
- Feature-backed values let product callers provide precise attribution
while preserving the existing core classifications
## What Changed
- Adds `ThreadSource::Feature(String)` for app-owned thread source
values
- Represents all app-server v2 thread sources as scalar strings, so a
feature source is supplied as `"automation"`
- Persists and emits the feature's plain string label, so `"automation"`
produces `thread_source="automation"` in analytics
- Keeps `user`, `subagent`, and `memory_consolidation` as explicit
core-owned values and regenerates the app-server schemas and TypeScript
bindings
## Verification
- `just write-app-server-schema`
- `cargo check --workspace`
- `just test -p codex-protocol
feature_thread_source_serializes_as_its_app_owned_label`
- `just test -p codex-app-server-protocol
thread_sources_round_trip_as_scalar_labels`
- `cargo test -p codex-analytics
thread_initialized_event_serializes_expected_shape`
- `just fmt`
## Why
This PR
https://github.com/openai/codex/pull/24161#discussion_r3325692763
revealed a subagent data modeling issue, where we overloaded
`forked_from_id` to also mean `parent_thread_id`. That's incorrect since
guardian and review subagents can be a subagent and NOT fork the main
thread's history.
The solution here is to explicitly store a new `parent_thread_id` on
`SessionMeta`, alongside `forked_from_id` which already exists. While
we're at it, also expose it in the app-server protocol on the `Thread`
object.
A thread->subagent relationship and a fork of thread history are
orthogonal concepts.
## What Changed
- Added top-level `parent_thread_id` persistence on `SessionMeta` and
runtime/session plumbing through `SessionConfiguredEvent`,
`CodexSpawnArgs`, `SessionConfiguration`, `ThreadConfigSnapshot`,
`TurnContext`, and `ModelClient`.
- Made turn metadata, request headers, analytics, and subagent-start
events read the separate runtime/top-level parent field instead of
deriving general parent lineage from `SessionSource` or
`forked_from_thread_id`.
- Passed parent lineage separately at delegated subagent, review,
guardian, agent-job, and multi-agent spawn construction sites;
copied-history fork lineage remains derived only from `InitialHistory`.
- Persisted and exposed parent lineage through rollout/thread-store
projections and app-server v2 `Thread.parentThreadId`.
- Updated app-server README text and regenerated app-server schema
fixtures for the additive `parentThreadId` response field.
## Why
`session_id` and `thread_id` are separate identities after #20437, but
app-server only surfaced `sessionId` on the `thread/start`,
`thread/resume`, and `thread/fork` response envelopes. Other
thread-bearing surfaces such as `thread/list`, `thread/read`,
`thread/started`, `thread/rollback`, `thread/metadata/update`, and
`thread/unarchive` either lacked the grouping key or forced clients to
special-case those three responses.
Making `sessionId` part of the reusable `Thread` payload gives every v2
API surface one place to expose session-tree identity.
## Mental model
1. thread.sessionId lives on `Thread`
2. It is a view/runtime identity for the current live session tree, not
durable stored lineage metadata
3. When app-server has a live loaded thread, it copies the real value
from core’s session_configured.session_id
4. When it only has stored/unloaded data, it falls back to
thread.sessionId = thread.id
## What changed
- Added `sessionId` to the v2
[`Thread`](https://github.com/openai/codex/blob/8fc9e9b4cf81b6f61d432e71f1eb266f6f104b63/codex-rs/app-server-protocol/src/protocol/v2/thread_data.rs#L105-L109).
- Removed the duplicate top-level `sessionId` fields from
`thread/start`, `thread/resume`, and `thread/fork`; clients should now
read `response.thread.sessionId`.
- Populated `thread.sessionId` when building live thread responses,
replaying loaded threads, and returning stored-thread summaries so the
field is present across start, resume, fork, list, read, rollback,
metadata-update, unarchive, and `thread/started` paths. See
[`load_thread_from_resume_source_or_send_internal`](https://github.com/openai/codex/blob/8fc9e9b4cf81b6f61d432e71f1eb266f6f104b63/codex-rs/app-server/src/request_processors/thread_processor.rs#L2824-L2918)
and
[`thread_from_stored_thread`](https://github.com/openai/codex/blob/8fc9e9b4cf81b6f61d432e71f1eb266f6f104b63/codex-rs/app-server/src/request_processors/thread_processor.rs#L3671-L3719).
- Preserved the stored-thread fallback: if a thread has not been loaded
into a live session tree yet, `thread.sessionId` falls back to
`thread.id`; once the thread is live again, the field reports the active
session tree root.
- Regenerated the JSON/TypeScript schemas and updated the app-server
README examples to show
[`thread.sessionId`](https://github.com/openai/codex/blob/8fc9e9b4cf81b6f61d432e71f1eb266f6f104b63/codex-rs/app-server/README.md#L306-L310)
on the thread object.
## Summary
- make `thread_source` an explicit optional thread-level field on
`thread/start`, `thread/fork`, and returned thread payloads
- persist `thread_source` in rollout/session metadata so resumed live
threads retain the original value
- replace the old best-effort `session_source` -> `thread_source`
mapping with an explicit caller-supplied analytics classification
## Why
Before this change, analytics `thread_source` was populated by a
best-effort mapping from `session_source`. `session_source` describes
the runtime/client surface, not the actual thread-level origin, so that
projection was not accurate enough to distinguish cases such as `user`,
`subagent`, `memory_consolidation`, and future thread origins reliably.
Making `thread_source` explicit keeps one thread-level analytics field
while letting callers provide the real classification directly instead
of recovering it indirectly from `session_source`.
## Impact
For new analytics events, `thread_source` now reflects the explicit
thread-level classification supplied by the caller rather than an
inferred value derived from `session_source`. Existing protocol fields
remain optional; callers that omit `threadSource` now produce `null`
instead of a best-effort inferred value.
## Validation
- `just write-app-server-schema`
- `cargo test -p codex-analytics -p codex-core -p
codex-app-server-protocol --no-run`
- `cargo test -p codex-app-server-protocol
generated_ts_optional_nullable_fields_only_in_params`
- `cargo test -p codex-analytics
thread_initialized_event_serializes_expected_shape`
- `cargo test -p codex-core
resume_stopped_thread_from_rollout_preserves_thread_source`
## Why
`codex-rs/app-server-protocol/src/protocol/v2.rs` had grown into a
single ~12k-line definition file for the entire app-server v2 API.
This is purely a mechanical refactor to break up the monolithic `v2.rs`
file that contains all app-server API v2 types into more modular files,
grouped by resource (e.g. account, thread, turn, etc.).
`just write-app-server-schema` shows no real changes, so we can be sure
that this is purely an internal organizational change.
## What changed
- Replaced the monolithic `protocol/v2.rs` with a `protocol/v2/` module
tree and a small `mod.rs` that only declares and reexports modules.
- Grouped v2 API definitions by conceptual owner, including `account`,
`apps`, `collaboration_mode`, `command_exec`, `config`, `device_key`,
`experimental_feature`, `feedback`, `fs`, `hook`, `item`, `mcp`,
`model`, `notification`, `permissions`, `plugin`, `process`, `realtime`,
`review`, `thread`, `thread_data`, `turn`, and `windows_sandbox`.
- Moved v2 tests into `protocol/v2/tests.rs` so `mod.rs` stays small.
- Kept shared protocol helpers in `protocol/v2/shared.rs`, including the
enum mirroring macro and common cross-resource types.
- Co-located resource-specific notifications and server-request payloads
with the modules that own those resources.
- Regenerated app-server protocol schema fixtures. The schema diffs are
non-semantic newline-only changes after the refactor.
## Verification
- `cargo check -p codex-app-server-protocol`
- `cargo test -p codex-app-server-protocol`
- `just write-app-server-schema`
Charlie Marsh