## What changed
- Add `thread/section/move` to atomically move a thread into, within, or out of a section. Threads can be inserted before an existing member or appended, and moves within a section preserve `sectionEnteredAt`.
- Add `section_position` sorting to `thread/list`, with ascending order as its default, and expose `sectionEnteredAt` in thread responses.
- Persist section positions and entry times in SQLite, including migration of existing section members into recency order. Section membership is no longer updated through `thread/metadata/update`.
## Testing
- Cover section moves, reordering, pagination, persistence across restarts and rollout reconciliation, concurrent updates, and rank renumbering.
GitOrigin-RevId: aec6d7ddedca5277029b5caf5c074975397e956c
## What changed
- Replace the `isPinned` thread metadata and filters with an optional persisted
`section` and `sectionId`.
- Add the paginated `threadSection/list` app-server method so clients can
discover sections even when they contain no threads.
- Seed a stable `Pinned` section, validate section assignments, and support
filtering for a specific section or for unsectioned threads.
## Testing
- Cover section protocol serialization, listing and pagination, metadata
updates, filtering, persistence, migration compatibility, and operation
without SQLite state.
GitOrigin-RevId: 7972b5471d29317b9387bfd90aa9f573f691ad4c
## What changed
- Add `isPinned` to thread responses and allow `thread/metadata/update` to pin or unpin stored threads.
- Add an `isPinned` filter to `thread/list`, including cursor-based pagination and combinations with relationship filters.
- Persist pin state in SQLite without modifying rollout files, default existing threads to unpinned, and preserve pins through reconciliation and archive transitions.
## Testing
- Cover protocol serialization, database migration and indexing, pin updates, filtered pagination, rollout reconciliation, and archive/unarchive behavior.
GitOrigin-RevId: c2eacabd6dae465e2ae6ce8a169e00740960cdb7
## Summary
- add the v2 `thread/metadata/update` API, including
protocol/schema/TypeScript exports and app-server docs
- patch stored thread `gitInfo` in sqlite without resuming the thread,
with validation plus support for explicit `null` clears
- repair missing sqlite thread rows from rollout data before patching,
and make those repairs safe by inserting only when absent and updating
only git columns so newer metadata is not clobbered
- keep sqlite authoritative for mutable thread git metadata by
preserving existing sqlite git fields during reconcile/backfill and only
using rollout `SessionMeta` git fields to fill gaps
- add regression coverage for the endpoint, repair paths, concurrent
sqlite writes, clearing git fields, and rollout/backfill reconciliation
- fix the login server shutdown race so cancelling before the waiter
starts still terminates `block_until_done()` correctly
## Testing
- `cargo test -p codex-state
apply_rollout_items_preserves_existing_git_branch_and_fills_missing_git_fields`
- `cargo test -p codex-state
update_thread_git_info_preserves_newer_non_git_metadata`
- `cargo test -p codex-core
backfill_sessions_preserves_existing_git_branch_and_fills_missing_git_fields`
- `cargo test -p codex-app-server thread_metadata_update`
- `cargo test`
- currently fails in existing `codex-core` grep-files tests with
`unsupported call: grep_files`:
- `suite::grep_files::grep_files_tool_collects_matches`
- `suite::grep_files::grep_files_tool_reports_empty_results`
